Papers

pande-labs-pubs

RSS feed from PubMed for the latest 100 Pande Lab publications.

Biophys J. 2014 Aug 19;107(4):974-82 Authors: Weber JK, Jack RL, Schwantes CR, Pande VS more...
Biophys J. 2014 Aug 19;107(4):947-55 Authors: Lapidus LJ, Acharya S, Schwantes CR, Wu L, Shukla more...
J Phys Chem B. 2014 Jun 19;118(24):6475-81 Authors: McGibbon RT, Schwantes CR, Pande VS more...
Biophys J. 2014 Mar 18;106(6):1381-90 Authors: Beauchamp KA, Pande VS, Das R more...
Biophys J. 2014 Mar 18;106(6):1359-70 Authors: Baiz CR, Lin YS, Peng CS, Beauchamp KA, Voelz more...
Nat Commun. 2014;5:3397 Authors: Shukla D, Meng Y, Roux B, Pande VS more...
J Chem Theory Comput. 2013 Aug 13;9(8):3267-3281 Authors: Sweet JC, Nowling RJ, Cickovski T, Sweet more...
Nat Chem. 2014 Jan;6(1):15-21 Authors: Kohlhoff KJ, Shukla D, Lawrenz M, Bowman GR, Konerding DE, more...
PLoS One. 2013;8(12):e78606 Authors: Lane TJ, Pande VS more...
J Phys Chem B. 2013 Dec 19;117(50):16236-48 Authors: Fried SD, Wang LP, Boxer SG, Ren more...
Adv Exp Med Biol. 2014;797:101-6 Authors: Pande VS more...
Adv Exp Med Biol. 2014;797:1-6 Authors: Bowman GR, Pande VS, Noé F more...
J Chem Inf Model. 2014 Jan 27;54(1):5-15 Authors: Kearnes SM, Haque IS, Pande VS more...
J Am Chem Soc. 2014 Jan 15;136(2):528-46 Authors: Klippenstein SJ, Pande VS, Truhlar DG more...
PLoS One. 2013;8(11):e79568 Authors: Novick PA, Ortiz OF, Poelman J, Abdulhay AY, Pande VS more...
J Chem Phys. 2013 Oct 14;139(14):145104 Authors: Lane TJ, Schwantes CR, Beauchamp KA, Pande VS more...
J Phys Chem B. 2013 Aug 29;117(34):9956-72 Authors: Wang LP, Head-Gordon T, Ponder JW, Ren more...
J Chem Theory Comput. 2013 Apr 9;9(4):2000-2009 Authors: Schwantes CR, Pande VS more...
J Chem Phys. 2013 Apr 28;138(16):165101 Authors: Weber JK, Pande VS more...
PLoS One. 2013;8(4):e58699 Authors: Chang HW, Bacallado S, Pande VS, Carlsson GE more...
J Am Chem Soc. 2013 Apr 17;135(15):5501-4 Authors: Weber JK, Jack RL, Pande VS more...
BMC Bioinformatics. 2013;14 Suppl 2:S8 Authors: Gu C, Chang HW, Maibaum L, Pande VS, more...
J Chem Theory Comput. 2013 Jan 8;9(1):461-469 Authors: Eastman P, Friedrichs MS, Chodera JD, Radmer more...
Biophys J. 2012 Dec 19;103(12):L47-9 Authors: Lin YS, Pande VS more...
Curr Opin Struct Biol. 2013 Feb;23(1):58-65 Authors: Lane TJ, Shukla D, Beauchamp KA, Pande more...
J Chem Phys. 2012 Dec 7;137(21):214105 Authors: Wagoner JA, Pande VS more...
Nat Immunol. 2012 Dec;13(12):1187-95 Authors: Ring AM, Lin JX, Feng D, Mitra S, Rickert more...
Proc Natl Acad Sci U S A. 2012 Oct 30;109(44):17807-13 Authors: Beauchamp KA, McGibbon more...
J Chem Theory Comput. 2012 Apr 10;8(4):1409-1414 Authors: Beauchamp KA, Lin YS, Das R, Pande more...
J Am Chem Soc. 2012 Aug 1;134(30):12565-77 Authors: Voelz VA, Jäger M, Yao S, more...
J Phys Chem B. 2012 Jun 14;116(23):6764-74 Authors: Lane TJ, Pande VS more...
Exploiting a natural conformational switch to engineer an interleukin-2 'superkine'. Nature. 2012 Apr 26;484(7395):529-33 Authors: more...
J Med Chem. 2012 Apr 12;55(7):3002-10 Authors: Novick PA, Lopes DH, Branson KM, Esteras-Chopo more...
Biophys J. 2012 Feb 22;102(4):859-67 Authors: Weber JK, Pande VS more...
Biophys J. 2012 Jan 18;102(2):315-24 Authors: Lin YS, Bowman GR, Beauchamp KA, Pande VS more...
J Chem Theory Comput. 2011 Oct 11;7(10):3405-3411 Authors: Weber JK, Pande VS more...
J Chem Theory Comput. 2011 Oct 11;7(10):3412-3419 Authors: Beauchamp KA, Bowman GR, Lane TJ, Maibaum more...
Proteins. 2011 Sep 7; Authors: Voelz VA, Pande VS more...
J Am Med Inform Assoc. 2012 Mar-Apr;19(2):186-9 Authors: Delp SL, Ku JP, Pande VS, more...
J Am Chem Soc. 2011 Nov 16;133(45):18413-9 Authors: Lane TJ, Bowman GR, Beauchamp K, more...
Phys Rev Lett. 2011 Aug 26;107(9):098102 Authors: Chodera JD, Pande VS more...
Proc Natl Acad Sci U S A. 2011 Sep 6;108(36):14713-4 Authors: Pande VS more...
J Chem Inf Model. 2011 Sep 26;51(9):2345-51 Authors: Haque IS, Pande VS, Walters WP more...
J Chem Inf Model. 2011 Sep 26;51(9):2248-53 Authors: Haque IS, Pande VS more...
Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):12969-70 Authors: Chodera JD, Pande more...
PLoS One. 2011;6(7):e21776 Authors: Rajadas J, Liu CW, Novick P, Kelley NW, Inayathullah M, more...
Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12734-9 Authors: Beauchamp KA, Ensign more...
J Chem Phys. 2011 Jun 28;134(24):244107 Authors: Chodera JD, Swope WC, Noé F, Prinz more...
Bioinformatics. 2011 Aug 15;27(16):2322-3 Authors: Kohlhoff KJ, Sosnick MH, Hsu WT, Pande VS, Altman more...
J Chem Phys. 2011 Jun 7;134(21):214103 Authors: Wagoner JA, Pande VS more...
Structure. 2011 Apr 13;19(4):523-33 Authors: Fenn TD, Schnieders MJ, Mustyakimov M, Wu C, Langan more...
Proc Natl Acad Sci U S A. 2011 Mar 8;108(10):3827-8 Authors: Kasson PM, Pande more...
J Am Chem Soc. 2011 Mar 23;133(11):3812-5 Authors: Kasson PM, Lindahl E, Pande VS more...
Curr Opin Struct Biol. 2011 Apr;21(2):150-60 Authors: Chodera JD, Mobley DL, Shirts MR, Dixon more...
Phys Rev Lett. 2010 Nov 5;105(19):198101 Authors: Pande VS more...
J Am Chem Soc. 2011 Feb 2;133(4):664-7 Authors: Bowman GR, Voelz VA, Pande VS more...
Curr Opin Struct Biol. 2011 Feb;21(1):4-11 Authors: Bowman GR, Voelz VA, Pande VS more...
PLoS Comput Biol. 2010;6(10):e1000963 Authors: Lucent D, Snow CD, Aitken CE, Pande VS more...
Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jul;82(1 Pt 2):016705 Authors: Ensign DL, Pande more...
PLoS Comput Biol. 2010 Jun;6(6):e1000829 Authors: Kasson PM, Lindahl E, Pande VS more...
Methods. 2010 Sep;52(1):99-105 Authors: Pande VS, Beauchamp K, Bowman GR more...
J Chem Theory Comput. 2010 Feb 9;6(2):434-437 Authors: Eastman P, Pande VS more...
Biophys J. 2010 Jun 16;98(12):2984-92 Authors: Fenn TD, Schnieders MJ, Brunger AT, Pande VS more...
Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10890-5 Authors: Bowman GR, Pande more...
J Chem Inf Model. 2010 Jun 28;50(6):1075-88 Authors: Haque IS, Pande VS more...
Cell Res. 2010 Jun;20(6):622-30 Authors: Bowman GR, Huang X, Pande VS more...
J Am Chem Soc. 2010 Apr 7;132(13):4702-9 Authors: Voelz VA, Singh VR, Wedemeyer WJ, more...
J Chem Inf Model. 2010 Apr 26;50(4):560-4 Authors: Haque IS, Pande VS, Walters WP more...
J Phys Chem B. 2010 Mar 4;114(8):2549-64 Authors: Ponder JW, Wu C, Ren P, more...
J Am Chem Soc. 2010 Feb 10;132(5):1526-8 Authors: Voelz VA, Bowman GR, Beauchamp K, more...
J Chem Theory Comput. 2010;6(3):787-794 Authors: Bowman GR, Ensign DL, Pande VS more...
J Phys Chem B. 2010 Jan 14;114(1):280-92 Authors: Ensign DL, Pande VS more...
"Cross-graining": efficient multi-scale simulation via Markov state models. Pac Symp Biocomput. 2010;:260-8 Authors: Kasson PM, Pande more...
Pac Symp Biocomput. 2010;:240-51 Authors: Izaguirre JA, Sweet CR, Pande VS more...
Pac Symp Biocomput. 2010;:228-39 Authors: Huang X, Yao Y, Bowman GR, Sun J, Guibas LJ, more...
RNA. 2009 Dec;15(12):2195-205 Authors: Chu VB, Lipfert J, Bai Y, Pande VS, Doniach S, more...
J Comput Chem. 2010 Apr 30;31(6):1268-72 Authors: Eastman P, Pande VS more...
Proc Natl Acad Sci U S A. 2009 Nov 24;106(47):19765-9 Authors: Huang X, Bowman more...
J Chem Phys. 2009 Sep 28;131(12):124101 Authors: Bowman GR, Beauchamp KA, Boxer G, Pande more...
Proteins. 2009;77 Suppl 9:66-80 Authors: MacCallum JL, Hua L, Schnieders MJ, Pande VS, Jacobson more...
Acta Crystallogr D Biol Crystallogr. 2009 Sep;65(Pt 9):952-65 Authors: Schnieders MJ, Fenn TD, Pande more...
J Phys Chem B. 2009 Sep 10;113(36):12410-23 Authors: Ensign DL, Pande VS more...
PLoS One. 2009;4(6):e5840 Authors: Bowman GR, Pande VS more...
J Comput Chem. 2010 Jan 15;31(1):117-32 Authors: Haque IS, Pande VS more...
Methods. 2009 Oct;49(2):197-201 Authors: Bowman GR, Huang X, Pande VS more...
Int J Mol Sci. 2009 Mar;10(3):1013-30 Authors: Voelz VA, Luttmann E, Bowman GR, Pande VS more...